Higra
stable

Informations

  • Changelog
    • 0.6.4
    • 0.6.2
    • 0.6.1
      • Breaking changes
      • Other changes
    • 0.6.0
      • Breaking changes
      • Other changes
    • 0.5.3
    • 0.5.2
    • 0.5.1
    • 0.5.0
      • Breaking change
      • Other changes
    • 0.4.5
    • 0.4.4
    • 0.4.2
      • Breaking change
      • Other changes
    • 0.4.1
    • 0.4.0
      • Breaking change
      • Other changes
    • 0.3.8
    • 0.3.7
    • 0.3.6
    • 0.3.5
      • Breaking change
      • Other changes
    • 0.3.4
    • 0.3.3
    • 0.3.2
    • 0.3.1
    • 0.3.0
      • Breaking change
      • Other changes
  • Installation
    • Pre-build binaries
    • Manual build
      • With cmake
        • Cmake options:
      • With setuptools
  • Developing c++ extensions
  • Examples
  • Troubleshooting

Fundamentals

  • Graphs
    • Vertices
      • Iterating on vertices
    • Edges
      • Iterating on edges
    • Degrees
    • Weighted graph
  • Trees
    • Constructor
    • Basic functions
    • Iterators
    • Children relation
    • Finding nodes
    • Accumulators
      • Parallel accumulator
      • Sequential accumulator
      • Sequential and combine accumulator
    • Propagators
      • Conditional parallel propagator
      • Conditional sequential propagator
      • Sequential propagate and accumulate

Python API

  • Hierarchy core functions
  • Hierarchy construction algorithms
    • Binary partition hierarchy
    • Component tree
    • Constrained connectivity hierarchy
    • Random hierarchy
    • Watershed hierarchy
  • Hierarchy processing algorithms
    • Alignment
    • Horizontal cut
    • Tree accumulators
    • Tree algorithms
    • Tree attributes
    • Tree energy optimization
  • Quality Assessment
    • Hierarchical cost
    • Hierarchy fragmentation curve
    • Partition score
  • Graph processing algorithms
    • Graph accumulators
    • Graph attributes
    • Graph core
    • Graph weighting
    • Region adjacency graph
    • Watershed
  • Data structures
    • Accumulators
    • Concepts
    • EmbeddingGrid
    • LCAFast
    • RegularGraph
    • Tree
    • UndirectedGraph
  • Interoperability
    • SciPy
  • Image applications
    • Contour 2d modelisation
    • Graph image
    • Mean probability boundary hierarchy
    • Tree of shapes
  • IO
    • Pink Graph
    • Tree IO
    • Plotting
  • Misc
    • Data cache
    • Utility functions

c++ API

  • Arrays
    • Quick start
      • Creating arrays
      • Properties
      • Element access
      • Display
      • Lazy Evaluation
  • HG namespace

Contributing

  • Contributing
    • Working on the C++ backend
    • Working on the Python frontend
    • Pushing a new version
Higra
  • Docs »
  • Overview: module code

All modules for which code is available

  • higra.accumulator.at_accumulator
  • higra.accumulator.graph_accumulator
  • higra.accumulator.tree_accumulator
  • higra.accumulator.tree_contour_accumulator
  • higra.algo.alignment
  • higra.algo.graph_core
  • higra.algo.graph_weights
  • higra.algo.horizontal_cuts
  • higra.algo.rag
  • higra.algo.tree
  • higra.algo.tree_energy_optimization
  • higra.algo.tree_fusion
  • higra.algo.tree_monotonic_regression
  • higra.algo.watershed
  • higra.assessment.fragmentation_curve
  • higra.assessment.hierarchical_cost
  • higra.attribute.graph_attributes
  • higra.attribute.tree_attributes
  • higra.concept
  • higra.data_cache
  • higra.hg_utils
  • higra.hierarchy.binary_partition_tree
  • higra.hierarchy.component_tree
  • higra.hierarchy.constrained_connectivity_hierarchy
  • higra.hierarchy.hierarchy_core
  • higra.hierarchy.random_hierarchy
  • higra.hierarchy.watershed_hierarchy
  • higra.higram
  • higra.image.graph_image
  • higra.image.hierarchy_mean_pb
  • higra.image.tree_of_shapes
  • higra.interop.interop_scipy
  • higra.io_utils.pink_io
  • higra.io_utils.tree_io
  • higra.plot.plot_graph
  • higra.plot.plot_tree
  • higra.sorting
  • higra.structure.lca_fast
  • higra.structure.regular_graph
  • higra.structure.tree_graph
  • higra.structure.undirected_graph

© Copyright 2018, Benjamin Perret Revision cee6734a.

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